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Cluster: HRGMv2_2656_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2656_8 HRGMv2_2656_8_9 6713 8335 + GT83
CAZyme HRGMv2_2656_8 HRGMv2_2656_8_10 8332 9327 + GT2
pfam HRGMv2_2656_8 HRGMv2_2656_8_11 9669 9920 + Ribosomal_L31
TF HRGMv2_2656_8 HRGMv2_2656_8_12 10665 12095 + HTH_8
TC HRGMv2_2656_8 HRGMv2_2656_8_13 12105 13196 - 3.A.6.2.1
pfam HRGMv2_2656_8 HRGMv2_2656_8_14 13189 13956 - Bac_export_1
pfam HRGMv2_2656_8 HRGMv2_2656_8_15 13953 14222 - Bac_export_3
TC HRGMv2_2656_8 HRGMv2_2656_8_16 14377 16065 + 3.A.1.20.1
Gene ID: HRGMv2_2656_8_9
Type: CAZyme
Location: 6713 - 8335 (+)
Gene ID: HRGMv2_2656_8_10
Type: CAZyme
Location: 8332 - 9327 (+)
Gene ID: HRGMv2_2656_8_11
Type: pfam
Location: 9669 - 9920 (+)
Gene ID: HRGMv2_2656_8_12
Type: TF
Location: 10665 - 12095 (+)
Gene ID: HRGMv2_2656_8_13
Type: TC
Location: 12105 - 13196 (-)
Gene ID: HRGMv2_2656_8_14
Type: pfam
Location: 13189 - 13956 (-)
Gene ID: HRGMv2_2656_8_15
Type: pfam
Location: 13953 - 14222 (-)
Gene ID: HRGMv2_2656_8_16
Type: TC
Location: 14377 - 16065 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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