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Cluster: HRGMv2_2656_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2656_2 HRGMv2_2656_2_14 13080 14159 - 3.A.6.1.1
TC HRGMv2_2656_2 HRGMv2_2656_2_15 14161 14961 - 3.A.6.1.1
TC HRGMv2_2656_2 HRGMv2_2656_2_16 14961 15233 - 3.A.6.1.1
STP HRGMv2_2656_2 HRGMv2_2656_2_17 15594 16178 - NUDIX
pfam HRGMv2_2656_2 HRGMv2_2656_2_18 16171 16842 - Zn_peptidase_2
TC HRGMv2_2656_2 HRGMv2_2656_2_19 17289 18218 + 3.A.1.5.22
TC HRGMv2_2656_2 HRGMv2_2656_2_20 18215 19048 + 3.A.1.5.22
pfam HRGMv2_2656_2 HRGMv2_2656_2_21 19490 20269 - Hexapep | Hexapep | Acetyltransf_11
CAZyme HRGMv2_2656_2 HRGMv2_2656_2_22 20271 21563 - CE11
Gene ID: HRGMv2_2656_2_14
Type: TC
Location: 13080 - 14159 (-)
Gene ID: HRGMv2_2656_2_15
Type: TC
Location: 14161 - 14961 (-)
Gene ID: HRGMv2_2656_2_16
Type: TC
Location: 14961 - 15233 (-)
Gene ID: HRGMv2_2656_2_17
Type: STP
Location: 15594 - 16178 (-)
Gene ID: HRGMv2_2656_2_18
Type: pfam
Location: 16171 - 16842 (-)
Gene ID: HRGMv2_2656_2_19
Type: TC
Location: 17289 - 18218 (+)
Gene ID: HRGMv2_2656_2_20
Type: TC
Location: 18215 - 19048 (+)
Gene ID: HRGMv2_2656_2_21
Type: pfam
Location: 19490 - 20269 (-)
Gene ID: HRGMv2_2656_2_22
Type: CAZyme
Location: 20271 - 21563 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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