Cluster: HRGMv2_2650_CGC8
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2650
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2650_3 | HRGMv2_2650_3_168 | 211342 | 212478 | + | 9.B.141.1.1 |
| pfam | HRGMv2_2650_3 | HRGMv2_2650_3_169 | 212588 | 214246 | + | tRNA-synt_1c | tRNA-synt_1c_C | tRNA-synt_1c_C2 |
| CAZyme | HRGMv2_2650_3 | HRGMv2_2650_3_170 | 214236 | 215255 | + | GH43_17 |
Gene ID: HRGMv2_2650_3_168
Type: TC
Location: 211342 - 212478 (+)
Type: TC
Location: 211342 - 212478 (+)
Gene ID: HRGMv2_2650_3_169
Type: pfam
Location: 212588 - 214246 (+)
Type: pfam
Location: 212588 - 214246 (+)
Gene ID: HRGMv2_2650_3_170
Type: CAZyme
Location: 214236 - 215255 (+)
Type: CAZyme
Location: 214236 - 215255 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Opitutales
Family
CAG-312
Genus
Merdousia
Species
Merdousia sp905214995
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.