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Cluster: HRGMv2_2650_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2650_3 HRGMv2_2650_3_51 65096 65791 + 3.A.1.122.2
TC HRGMv2_2650_3 HRGMv2_2650_3_52 65788 67140 + 3.A.1.122.2
TC HRGMv2_2650_3 HRGMv2_2650_3_53 67154 68638 + 2.A.6.2.14
STP HRGMv2_2650_3 HRGMv2_2650_3_54 69145 69714 + SIS
CAZyme HRGMv2_2650_3 HRGMv2_2650_3_55 69711 70706 + GT9
pfam HRGMv2_2650_3 HRGMv2_2650_3_56 70703 71212 - Hydrolase | PNK3P | Hydrolase_like | HAD_2
STP HRGMv2_2650_3 HRGMv2_2650_3_57 71209 72684 - PfkB
CAZyme HRGMv2_2650_3 HRGMv2_2650_3_58 72791 73816 + GT4
Gene ID: HRGMv2_2650_3_51
Type: TC
Location: 65096 - 65791 (+)
Gene ID: HRGMv2_2650_3_52
Type: TC
Location: 65788 - 67140 (+)
Gene ID: HRGMv2_2650_3_53
Type: TC
Location: 67154 - 68638 (+)
Gene ID: HRGMv2_2650_3_54
Type: STP
Location: 69145 - 69714 (+)
Gene ID: HRGMv2_2650_3_55
Type: CAZyme
Location: 69711 - 70706 (+)
Gene ID: HRGMv2_2650_3_56
Type: pfam
Location: 70703 - 71212 (-)
Gene ID: HRGMv2_2650_3_57
Type: STP
Location: 71209 - 72684 (-)
Gene ID: HRGMv2_2650_3_58
Type: CAZyme
Location: 72791 - 73816 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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