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Cluster: HRGMv2_2650_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2650_2 HRGMv2_2650_2_195 245890 248034 + GH165
NULL(UNKNOWN) HRGMv2_2650_2 HRGMv2_2650_2_196 248203 249621 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2650_2 HRGMv2_2650_2_197 249875 252634 - 4.A.2.1.17
CAZyme HRGMv2_2650_2 HRGMv2_2650_2_198 253252 254778 - GH20
CAZyme HRGMv2_2650_2 HRGMv2_2650_2_199 255119 258388 + GH148
pfam HRGMv2_2650_2 HRGMv2_2650_2_200 258415 259434 - LpxR
pfam HRGMv2_2650_2 HRGMv2_2650_2_201 259447 260046 + Cons_hypoth95
TC HRGMv2_2650_2 HRGMv2_2650_2_202 260043 261152 + 3.A.15.2.1
Gene ID: HRGMv2_2650_2_195
Type: CAZyme
Location: 245890 - 248034 (+)
Gene ID: HRGMv2_2650_2_196
Type:
Location: 248203 - 249621 (-)
Gene ID: HRGMv2_2650_2_197
Type: TC
Location: 249875 - 252634 (-)
Gene ID: HRGMv2_2650_2_198
Type: CAZyme
Location: 253252 - 254778 (-)
Gene ID: HRGMv2_2650_2_199
Type: CAZyme
Location: 255119 - 258388 (+)
Gene ID: HRGMv2_2650_2_200
Type: pfam
Location: 258415 - 259434 (-)
Gene ID: HRGMv2_2650_2_201
Type: pfam
Location: 259447 - 260046 (+)
Gene ID: HRGMv2_2650_2_202
Type: TC
Location: 260043 - 261152 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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