Cluster: HRGMv2_2650_CGC33
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2650
- CGC Family ID: CGCFAM_02687
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2650_23 | HRGMv2_2650_23_7 | 6226 | 6918 | - | 3.A.1.125.5 |
| TC | HRGMv2_2650_23 | HRGMv2_2650_23_8 | 6911 | 8149 | - | 3.A.1.125.5 |
| pfam | HRGMv2_2650_23 | HRGMv2_2650_23_9 | 8153 | 9643 | - | tRNA-synt_2 | tRNA_anti-codon |
| CAZyme | HRGMv2_2650_23 | HRGMv2_2650_23_10 | 10028 | 11968 | - | GH127 |
Gene ID: HRGMv2_2650_23_7
Type: TC
Location: 6226 - 6918 (-)
Type: TC
Location: 6226 - 6918 (-)
Gene ID: HRGMv2_2650_23_8
Type: TC
Location: 6911 - 8149 (-)
Type: TC
Location: 6911 - 8149 (-)
Gene ID: HRGMv2_2650_23_9
Type: pfam
Location: 8153 - 9643 (-)
Type: pfam
Location: 8153 - 9643 (-)
Gene ID: HRGMv2_2650_23_10
Type: CAZyme
Location: 10028 - 11968 (-)
Type: CAZyme
Location: 10028 - 11968 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Opitutales
Family
CAG-312
Genus
Merdousia
Species
Merdousia sp905214995
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.