Cluster: HRGMv2_2650_CGC32
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2650
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2650_21 | HRGMv2_2650_21_6 | 3845 | 5191 | + | 2.A.1.21.7 |
| pfam | HRGMv2_2650_21 | HRGMv2_2650_21_7 | 5380 | 6519 | - | DNA_pol3_delta |
| CAZyme | HRGMv2_2650_21 | HRGMv2_2650_21_8 | 6606 | 9041 | + | CBM67 | GH78 |
| NULL(UNKNOWN) | HRGMv2_2650_21 | HRGMv2_2650_21_9 | 9227 | 9991 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2650_21 | HRGMv2_2650_21_10 | 10226 | 12154 | + | 3.A.1.121.4 |
Gene ID: HRGMv2_2650_21_6
Type: TC
Location: 3845 - 5191 (+)
Type: TC
Location: 3845 - 5191 (+)
Gene ID: HRGMv2_2650_21_7
Type: pfam
Location: 5380 - 6519 (-)
Type: pfam
Location: 5380 - 6519 (-)
Gene ID: HRGMv2_2650_21_8
Type: CAZyme
Location: 6606 - 9041 (+)
Type: CAZyme
Location: 6606 - 9041 (+)
Gene ID: HRGMv2_2650_21_9
Type:
Location: 9227 - 9991 (+)
Type:
Location: 9227 - 9991 (+)
Gene ID: HRGMv2_2650_21_10
Type: TC
Location: 10226 - 12154 (+)
Type: TC
Location: 10226 - 12154 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Opitutales
Family
CAG-312
Genus
Merdousia
Species
Merdousia sp905214995
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.