Cluster: HRGMv2_2650_CGC29
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 5
- Substrate:
- Genome ID: HRGMv2_2650
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2650_15 | HRGMv2_2650_15_22 | 26634 | 27383 | - | 1.C.109.1.2 |
| NULL(UNKNOWN) | HRGMv2_2650_15 | HRGMv2_2650_15_23 | 27380 | 27682 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2650_15 | HRGMv2_2650_15_24 | 27778 | 29382 | + | CE20 |
| CAZyme | HRGMv2_2650_15 | HRGMv2_2650_15_25 | 29421 | 30962 | + | CE20 |
| CAZyme | HRGMv2_2650_15 | HRGMv2_2650_15_26 | 30978 | 32564 | + | CE20 |
| CAZyme | HRGMv2_2650_15 | HRGMv2_2650_15_27 | 32573 | 34159 | + | CE20 |
| CAZyme | HRGMv2_2650_15 | HRGMv2_2650_15_28 | 34165 | 35544 | + | GH28 |
Gene ID: HRGMv2_2650_15_22
Type: TC
Location: 26634 - 27383 (-)
Type: TC
Location: 26634 - 27383 (-)
Gene ID: HRGMv2_2650_15_23
Type:
Location: 27380 - 27682 (-)
Type:
Location: 27380 - 27682 (-)
Gene ID: HRGMv2_2650_15_24
Type: CAZyme
Location: 27778 - 29382 (+)
Type: CAZyme
Location: 27778 - 29382 (+)
Gene ID: HRGMv2_2650_15_25
Type: CAZyme
Location: 29421 - 30962 (+)
Type: CAZyme
Location: 29421 - 30962 (+)
Gene ID: HRGMv2_2650_15_26
Type: CAZyme
Location: 30978 - 32564 (+)
Type: CAZyme
Location: 30978 - 32564 (+)
Gene ID: HRGMv2_2650_15_27
Type: CAZyme
Location: 32573 - 34159 (+)
Type: CAZyme
Location: 32573 - 34159 (+)
Gene ID: HRGMv2_2650_15_28
Type: CAZyme
Location: 34165 - 35544 (+)
Type: CAZyme
Location: 34165 - 35544 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Opitutales
Family
CAG-312
Genus
Merdousia
Species
Merdousia sp905214995
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.