Cluster: HRGMv2_2650_CGC27
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2650
- CGC Family ID: CGCFAM_07053
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2650_13 | HRGMv2_2650_13_25 | 29410 | 31638 | - | GH95 |
| NULL(UNKNOWN) | HRGMv2_2650_13 | HRGMv2_2650_13_26 | 32235 | 33815 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2650_13 | HRGMv2_2650_13_27 | 35052 | 36497 | + | GH13 |
| pfam | HRGMv2_2650_13 | HRGMv2_2650_13_28 | 36597 | 37022 | + | PTS_EIIA_2 |
| TC | HRGMv2_2650_13 | HRGMv2_2650_13_29 | 37036 | 38781 | + | 2.A.49.5.3 |
Gene ID: HRGMv2_2650_13_25
Type: CAZyme
Location: 29410 - 31638 (-)
Type: CAZyme
Location: 29410 - 31638 (-)
Gene ID: HRGMv2_2650_13_26
Type:
Location: 32235 - 33815 (+)
Type:
Location: 32235 - 33815 (+)
Gene ID: HRGMv2_2650_13_27
Type: CAZyme
Location: 35052 - 36497 (+)
Type: CAZyme
Location: 35052 - 36497 (+)
Gene ID: HRGMv2_2650_13_28
Type: pfam
Location: 36597 - 37022 (+)
Type: pfam
Location: 36597 - 37022 (+)
Gene ID: HRGMv2_2650_13_29
Type: TC
Location: 37036 - 38781 (+)
Type: TC
Location: 37036 - 38781 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Opitutales
Family
CAG-312
Genus
Merdousia
Species
Merdousia sp905214995
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.