Cluster: HRGMv2_2650_CGC24
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2650
- CGC Family ID: CGCFAM_06152
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2650_11 | HRGMv2_2650_11_30 | 33833 | 35158 | + | GH177 |
| pfam | HRGMv2_2650_11 | HRGMv2_2650_11_31 | 35449 | 35988 | - | ThrE_2 |
| TC | HRGMv2_2650_11 | HRGMv2_2650_11_32 | 35985 | 36767 | - | 2.A.79.2.1 |
| TC | HRGMv2_2650_11 | HRGMv2_2650_11_33 | 37154 | 38368 | - | 1.A.23.4.5 |
Gene ID: HRGMv2_2650_11_30
Type: CAZyme
Location: 33833 - 35158 (+)
Type: CAZyme
Location: 33833 - 35158 (+)
Gene ID: HRGMv2_2650_11_31
Type: pfam
Location: 35449 - 35988 (-)
Type: pfam
Location: 35449 - 35988 (-)
Gene ID: HRGMv2_2650_11_32
Type: TC
Location: 35985 - 36767 (-)
Type: TC
Location: 35985 - 36767 (-)
Gene ID: HRGMv2_2650_11_33
Type: TC
Location: 37154 - 38368 (-)
Type: TC
Location: 37154 - 38368 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Opitutales
Family
CAG-312
Genus
Merdousia
Species
Merdousia sp905214995
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.