Cluster: HRGMv2_2650_CGC22
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2650
- CGC Family ID: CGCFAM_06149
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2650_10 | HRGMv2_2650_10_34 | 36397 | 38805 | - | 8.A.3.1.2 |
| TC | HRGMv2_2650_10 | HRGMv2_2650_10_35 | 38890 | 39468 | - | 1.B.18.3.7 |
| pfam | HRGMv2_2650_10 | HRGMv2_2650_10_36 | 39651 | 41615 | + | Transketolase_N | Transket_pyr | Transketolase_C_1 |
| CAZyme | HRGMv2_2650_10 | HRGMv2_2650_10_37 | 41787 | 42755 | - | GT2 |
Gene ID: HRGMv2_2650_10_34
Type: TC
Location: 36397 - 38805 (-)
Type: TC
Location: 36397 - 38805 (-)
Gene ID: HRGMv2_2650_10_35
Type: TC
Location: 38890 - 39468 (-)
Type: TC
Location: 38890 - 39468 (-)
Gene ID: HRGMv2_2650_10_36
Type: pfam
Location: 39651 - 41615 (+)
Type: pfam
Location: 39651 - 41615 (+)
Gene ID: HRGMv2_2650_10_37
Type: CAZyme
Location: 41787 - 42755 (-)
Type: CAZyme
Location: 41787 - 42755 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Opitutales
Family
CAG-312
Genus
Merdousia
Species
Merdousia sp905214995
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.