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Cluster: HRGMv2_2650_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2650_10 HRGMv2_2650_10_8 10399 12579 + GH36
pfam HRGMv2_2650_10 HRGMv2_2650_10_9 12658 13419 + His_Phos_1
NULL(UNKNOWN) HRGMv2_2650_10 HRGMv2_2650_10_10 13475 13852 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2650_10 HRGMv2_2650_10_11 13991 15322 + 2.A.45.2.2
NULL(UNKNOWN) HRGMv2_2650_10 HRGMv2_2650_10_12 15338 15502 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2650_10 HRGMv2_2650_10_13 15521 17113 + 3.B.1.1.2
NULL(UNKNOWN) HRGMv2_2650_10 HRGMv2_2650_10_14 17422 18480 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2650_10 HRGMv2_2650_10_15 18652 19578 + GT8
NULL(UNKNOWN) HRGMv2_2650_10 HRGMv2_2650_10_16 19672 20397 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2650_10 HRGMv2_2650_10_17 20399 21082 + CE14
pfam HRGMv2_2650_10 HRGMv2_2650_10_18 21480 22052 - Ferritin | Rubrerythrin | RUBY_RBDX
TF HRGMv2_2650_10 HRGMv2_2650_10_19 22049 22486 - FUR
TC HRGMv2_2650_10 HRGMv2_2650_10_20 22603 23400 + 2.A.5.5.5
TC HRGMv2_2650_10 HRGMv2_2650_10_21 23472 23885 + 2.A.7.2.1
NULL(UNKNOWN) HRGMv2_2650_10 HRGMv2_2650_10_22 24241 24606 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_2650_10 HRGMv2_2650_10_23 24620 24751 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2650_10 HRGMv2_2650_10_24 24842 26416 - GH30_4
CAZyme HRGMv2_2650_10 HRGMv2_2650_10_25 26521 28908 - GH13_14
Gene ID: HRGMv2_2650_10_8
Type: CAZyme
Location: 10399 - 12579 (+)
Gene ID: HRGMv2_2650_10_9
Type: pfam
Location: 12658 - 13419 (+)
Gene ID: HRGMv2_2650_10_10
Type:
Location: 13475 - 13852 (+)
Gene ID: HRGMv2_2650_10_11
Type: TC
Location: 13991 - 15322 (+)
Gene ID: HRGMv2_2650_10_12
Type:
Location: 15338 - 15502 (+)
Gene ID: HRGMv2_2650_10_13
Type: TC
Location: 15521 - 17113 (+)
Gene ID: HRGMv2_2650_10_14
Type:
Location: 17422 - 18480 (-)
Gene ID: HRGMv2_2650_10_15
Type: CAZyme
Location: 18652 - 19578 (+)
Gene ID: HRGMv2_2650_10_16
Type:
Location: 19672 - 20397 (+)
Gene ID: HRGMv2_2650_10_17
Type: CAZyme
Location: 20399 - 21082 (+)
Gene ID: HRGMv2_2650_10_18
Type: pfam
Location: 21480 - 22052 (-)
Gene ID: HRGMv2_2650_10_19
Type: TF
Location: 22049 - 22486 (-)
Gene ID: HRGMv2_2650_10_20
Type: TC
Location: 22603 - 23400 (+)
Gene ID: HRGMv2_2650_10_21
Type: TC
Location: 23472 - 23885 (+)
Gene ID: HRGMv2_2650_10_22
Type:
Location: 24241 - 24606 (-)
Gene ID: HRGMv2_2650_10_23
Type:
Location: 24620 - 24751 (-)
Gene ID: HRGMv2_2650_10_24
Type: CAZyme
Location: 24842 - 26416 (-)
Gene ID: HRGMv2_2650_10_25
Type: CAZyme
Location: 26521 - 28908 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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