Cluster: HRGMv2_2650_CGC2
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2650
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2650_1 | HRGMv2_2650_1_33 | 39612 | 40736 | + | GH5 |
| pfam | HRGMv2_2650_1 | HRGMv2_2650_1_34 | 40879 | 43569 | - | tRNA-synt_1 | Anticodon_1 | tRNA-synt_1g | tRNA-synt_1g | Val_tRNA-synt_C | tRNA-synt_1_2 |
| TC | HRGMv2_2650_1 | HRGMv2_2650_1_35 | 43759 | 45081 | - | 2.A.1.1.3 |
Gene ID: HRGMv2_2650_1_33
Type: CAZyme
Location: 39612 - 40736 (+)
Type: CAZyme
Location: 39612 - 40736 (+)
Gene ID: HRGMv2_2650_1_34
Type: pfam
Location: 40879 - 43569 (-)
Type: pfam
Location: 40879 - 43569 (-)
Gene ID: HRGMv2_2650_1_35
Type: TC
Location: 43759 - 45081 (-)
Type: TC
Location: 43759 - 45081 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Opitutales
Family
CAG-312
Genus
Merdousia
Species
Merdousia sp905214995
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.