Cluster: HRGMv2_2650_CGC19
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2650
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2650_9 | HRGMv2_2650_9_28 | 38862 | 40013 | + | GH99 |
| pfam | HRGMv2_2650_9 | HRGMv2_2650_9_29 | 40302 | 40736 | - | ExbD |
| pfam | HRGMv2_2650_9 | HRGMv2_2650_9_30 | 40738 | 41145 | - | ExbD |
| TC | HRGMv2_2650_9 | HRGMv2_2650_9_31 | 41163 | 42023 | - | 1.A.30.2.9 |
Gene ID: HRGMv2_2650_9_28
Type: CAZyme
Location: 38862 - 40013 (+)
Type: CAZyme
Location: 38862 - 40013 (+)
Gene ID: HRGMv2_2650_9_29
Type: pfam
Location: 40302 - 40736 (-)
Type: pfam
Location: 40302 - 40736 (-)
Gene ID: HRGMv2_2650_9_30
Type: pfam
Location: 40738 - 41145 (-)
Type: pfam
Location: 40738 - 41145 (-)
Gene ID: HRGMv2_2650_9_31
Type: TC
Location: 41163 - 42023 (-)
Type: TC
Location: 41163 - 42023 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Opitutales
Family
CAG-312
Genus
Merdousia
Species
Merdousia sp905214995
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.