Cluster: HRGMv2_2650_CGC18
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2650
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2650_8 | HRGMv2_2650_8_11 | 9201 | 11606 | + | 9.B.174.1.2 |
| pfam | HRGMv2_2650_8 | HRGMv2_2650_8_12 | 11603 | 12076 | + | LacAB_rpiB |
| pfam | HRGMv2_2650_8 | HRGMv2_2650_8_13 | 12538 | 13473 | + | GFO_IDH_MocA | F420_oxidored | GFO_IDH_MocA_C3 |
| CAZyme | HRGMv2_2650_8 | HRGMv2_2650_8_14 | 13504 | 14715 | + | GT19 |
Gene ID: HRGMv2_2650_8_11
Type: TC
Location: 9201 - 11606 (+)
Type: TC
Location: 9201 - 11606 (+)
Gene ID: HRGMv2_2650_8_12
Type: pfam
Location: 11603 - 12076 (+)
Type: pfam
Location: 11603 - 12076 (+)
Gene ID: HRGMv2_2650_8_13
Type: pfam
Location: 12538 - 13473 (+)
Type: pfam
Location: 12538 - 13473 (+)
Gene ID: HRGMv2_2650_8_14
Type: CAZyme
Location: 13504 - 14715 (+)
Type: CAZyme
Location: 13504 - 14715 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Opitutales
Family
CAG-312
Genus
Merdousia
Species
Merdousia sp905214995
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.