Cluster: HRGMv2_2650_CGC16
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2650
- CGC Family ID: CGCFAM_04638
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2650_7 | HRGMv2_2650_7_15 | 18647 | 20386 | + | 3.A.11.1.1 |
| pfam | HRGMv2_2650_7 | HRGMv2_2650_7_16 | 20383 | 21828 | + | ATP_bind_3 | TilS_C |
| TC | HRGMv2_2650_7 | HRGMv2_2650_7_17 | 21855 | 23870 | + | 3.A.16.1.1 |
| CAZyme | HRGMv2_2650_7 | HRGMv2_2650_7_18 | 24039 | 24938 | + | GH16_3 |
Gene ID: HRGMv2_2650_7_15
Type: TC
Location: 18647 - 20386 (+)
Type: TC
Location: 18647 - 20386 (+)
Gene ID: HRGMv2_2650_7_16
Type: pfam
Location: 20383 - 21828 (+)
Type: pfam
Location: 20383 - 21828 (+)
Gene ID: HRGMv2_2650_7_17
Type: TC
Location: 21855 - 23870 (+)
Type: TC
Location: 21855 - 23870 (+)
Gene ID: HRGMv2_2650_7_18
Type: CAZyme
Location: 24039 - 24938 (+)
Type: CAZyme
Location: 24039 - 24938 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Opitutales
Family
CAG-312
Genus
Merdousia
Species
Merdousia sp905214995
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.