Cluster: HRGMv2_2650_CGC13
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2650
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2650_6 | HRGMv2_2650_6_34 | 43056 | 44156 | + | 9.B.146.1.6 |
| pfam | HRGMv2_2650_6 | HRGMv2_2650_6_35 | 44156 | 45460 | + | Mur_ligase_C | Mur_ligase_M |
| pfam | HRGMv2_2650_6 | HRGMv2_2650_6_36 | 45484 | 46632 | + | LysM | LysM | LysM |
| TC | HRGMv2_2650_6 | HRGMv2_2650_6_37 | 46643 | 47770 | + | 2.A.103.1.3 |
| CAZyme | HRGMv2_2650_6 | HRGMv2_2650_6_38 | 47767 | 48867 | + | GT28 |
Gene ID: HRGMv2_2650_6_34
Type: TC
Location: 43056 - 44156 (+)
Type: TC
Location: 43056 - 44156 (+)
Gene ID: HRGMv2_2650_6_35
Type: pfam
Location: 44156 - 45460 (+)
Type: pfam
Location: 44156 - 45460 (+)
Gene ID: HRGMv2_2650_6_36
Type: pfam
Location: 45484 - 46632 (+)
Type: pfam
Location: 45484 - 46632 (+)
Gene ID: HRGMv2_2650_6_37
Type: TC
Location: 46643 - 47770 (+)
Type: TC
Location: 46643 - 47770 (+)
Gene ID: HRGMv2_2650_6_38
Type: CAZyme
Location: 47767 - 48867 (+)
Type: CAZyme
Location: 47767 - 48867 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Opitutales
Family
CAG-312
Genus
Merdousia
Species
Merdousia sp905214995
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.