Cluster: HRGMv2_2650_CGC10
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2650
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2650_4 | HRGMv2_2650_4_126 | 142775 | 143626 | + | 3.D.10.1.2 |
| TC | HRGMv2_2650_4 | HRGMv2_2650_4_127 | 143644 | 145572 | + | 3.D.10.1.2 |
| TC | HRGMv2_2650_4 | HRGMv2_2650_4_128 | 145595 | 146350 | + | 3.D.10.1.5 |
| pfam | HRGMv2_2650_4 | HRGMv2_2650_4_129 | 146489 | 147904 | + | Glyco_hydro_42 | DUF4832 |
| CAZyme | HRGMv2_2650_4 | HRGMv2_2650_4_130 | 147921 | 149417 | + | GH10 |
Gene ID: HRGMv2_2650_4_126
Type: TC
Location: 142775 - 143626 (+)
Type: TC
Location: 142775 - 143626 (+)
Gene ID: HRGMv2_2650_4_127
Type: TC
Location: 143644 - 145572 (+)
Type: TC
Location: 143644 - 145572 (+)
Gene ID: HRGMv2_2650_4_128
Type: TC
Location: 145595 - 146350 (+)
Type: TC
Location: 145595 - 146350 (+)
Gene ID: HRGMv2_2650_4_129
Type: pfam
Location: 146489 - 147904 (+)
Type: pfam
Location: 146489 - 147904 (+)
Gene ID: HRGMv2_2650_4_130
Type: CAZyme
Location: 147921 - 149417 (+)
Type: CAZyme
Location: 147921 - 149417 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Opitutales
Family
CAG-312
Genus
Merdousia
Species
Merdousia sp905214995
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.