Cluster: HRGMv2_2649_CGC9
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_2649
- CGC Family ID: CGCFAM_06152
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2649_6 | HRGMv2_2649_6_49 | 55700 | 58000 | + | GH95 |
| pfam | HRGMv2_2649_6 | HRGMv2_2649_6_50 | 58220 | 58603 | + | 4HBT |
| CAZyme | HRGMv2_2649_6 | HRGMv2_2649_6_51 | 58757 | 60082 | + | GH177 |
| pfam | HRGMv2_2649_6 | HRGMv2_2649_6_52 | 60368 | 60907 | - | ThrE_2 |
| pfam | HRGMv2_2649_6 | HRGMv2_2649_6_53 | 60904 | 61737 | - | ThrE |
| CAZyme | HRGMv2_2649_6 | HRGMv2_2649_6_54 | 61913 | 63256 | - | GH109 |
| TC | HRGMv2_2649_6 | HRGMv2_2649_6_55 | 63386 | 64600 | - | 1.A.23.4.5 |
Gene ID: HRGMv2_2649_6_49
Type: CAZyme
Location: 55700 - 58000 (+)
Type: CAZyme
Location: 55700 - 58000 (+)
Gene ID: HRGMv2_2649_6_50
Type: pfam
Location: 58220 - 58603 (+)
Type: pfam
Location: 58220 - 58603 (+)
Gene ID: HRGMv2_2649_6_51
Type: CAZyme
Location: 58757 - 60082 (+)
Type: CAZyme
Location: 58757 - 60082 (+)
Gene ID: HRGMv2_2649_6_52
Type: pfam
Location: 60368 - 60907 (-)
Type: pfam
Location: 60368 - 60907 (-)
Gene ID: HRGMv2_2649_6_53
Type: pfam
Location: 60904 - 61737 (-)
Type: pfam
Location: 60904 - 61737 (-)
Gene ID: HRGMv2_2649_6_54
Type: CAZyme
Location: 61913 - 63256 (-)
Type: CAZyme
Location: 61913 - 63256 (-)
Gene ID: HRGMv2_2649_6_55
Type: TC
Location: 63386 - 64600 (-)
Type: TC
Location: 63386 - 64600 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Opitutales
Family
CAG-312
Genus
Merdousia
Species
Merdousia sp001917305
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.