Cluster: HRGMv2_2649_CGC7
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2649
- CGC Family ID: CGCFAM_01179
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2649_5 | HRGMv2_2649_5_13 | 16407 | 17267 | + | 1.A.30.2.9 |
| pfam | HRGMv2_2649_5 | HRGMv2_2649_5_14 | 17285 | 17692 | + | ExbD |
| pfam | HRGMv2_2649_5 | HRGMv2_2649_5_15 | 17695 | 18129 | + | ExbD |
| CAZyme | HRGMv2_2649_5 | HRGMv2_2649_5_16 | 18551 | 19702 | - | GH99 |
Gene ID: HRGMv2_2649_5_13
Type: TC
Location: 16407 - 17267 (+)
Type: TC
Location: 16407 - 17267 (+)
Gene ID: HRGMv2_2649_5_14
Type: pfam
Location: 17285 - 17692 (+)
Type: pfam
Location: 17285 - 17692 (+)
Gene ID: HRGMv2_2649_5_15
Type: pfam
Location: 17695 - 18129 (+)
Type: pfam
Location: 17695 - 18129 (+)
Gene ID: HRGMv2_2649_5_16
Type: CAZyme
Location: 18551 - 19702 (-)
Type: CAZyme
Location: 18551 - 19702 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Opitutales
Family
CAG-312
Genus
Merdousia
Species
Merdousia sp001917305
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.