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Cluster: HRGMv2_2649_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2649_4 HRGMv2_2649_4_38 45263 47407 + GH165
NULL(UNKNOWN) HRGMv2_2649_4 HRGMv2_2649_4_39 47618 49054 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2649_4 HRGMv2_2649_4_40 49320 52079 - 4.A.2.1.17
NULL(UNKNOWN) HRGMv2_2649_4 HRGMv2_2649_4_41 52218 52793 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2649_4 HRGMv2_2649_4_42 52696 54222 - GH20
NULL(UNKNOWN) HRGMv2_2649_4 HRGMv2_2649_4_43 54310 56193 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_2649_4 HRGMv2_2649_4_44 56195 58051 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2649_4 HRGMv2_2649_4_45 58361 59956 - GH105
Gene ID: HRGMv2_2649_4_38
Type: CAZyme
Location: 45263 - 47407 (+)
Gene ID: HRGMv2_2649_4_39
Type:
Location: 47618 - 49054 (-)
Gene ID: HRGMv2_2649_4_40
Type: TC
Location: 49320 - 52079 (-)
Gene ID: HRGMv2_2649_4_41
Type:
Location: 52218 - 52793 (+)
Gene ID: HRGMv2_2649_4_42
Type: CAZyme
Location: 52696 - 54222 (-)
Gene ID: HRGMv2_2649_4_43
Type:
Location: 54310 - 56193 (-)
Gene ID: HRGMv2_2649_4_44
Type:
Location: 56195 - 58051 (-)
Gene ID: HRGMv2_2649_4_45
Type: CAZyme
Location: 58361 - 59956 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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