Cluster: HRGMv2_2649_CGC4
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2649
- CGC Family ID: CGCFAM_10140
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2649_3 | HRGMv2_2649_3_16 | 16330 | 18492 | - | GH78 |
| STP | HRGMv2_2649_3 | HRGMv2_2649_3_17 | 18703 | 18897 | + | Nitro_FeMo-Co |
| NULL(UNKNOWN) | HRGMv2_2649_3 | HRGMv2_2649_3_18 | 18885 | 19091 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2649_3 | HRGMv2_2649_3_19 | 19109 | 21397 | - | 2.A.16.2.2 |
Gene ID: HRGMv2_2649_3_16
Type: CAZyme
Location: 16330 - 18492 (-)
Type: CAZyme
Location: 16330 - 18492 (-)
Gene ID: HRGMv2_2649_3_17
Type: STP
Location: 18703 - 18897 (+)
Type: STP
Location: 18703 - 18897 (+)
Gene ID: HRGMv2_2649_3_18
Type:
Location: 18885 - 19091 (+)
Type:
Location: 18885 - 19091 (+)
Gene ID: HRGMv2_2649_3_19
Type: TC
Location: 19109 - 21397 (-)
Type: TC
Location: 19109 - 21397 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Opitutales
Family
CAG-312
Genus
Merdousia
Species
Merdousia sp001917305
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.