Cluster: HRGMv2_2649_CGC35
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2649
- CGC Family ID: CGCFAM_06150
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2649_70 | HRGMv2_2649_70_1 | 102 | 1211 | - | 3.A.15.2.1 |
| pfam | HRGMv2_2649_70 | HRGMv2_2649_70_2 | 1208 | 1807 | - | Cons_hypoth95 |
| pfam | HRGMv2_2649_70 | HRGMv2_2649_70_3 | 1820 | 2839 | + | LpxR |
| CAZyme | HRGMv2_2649_70 | HRGMv2_2649_70_4 | 2864 | 6133 | - | GH148 |
Gene ID: HRGMv2_2649_70_1
Type: TC
Location: 102 - 1211 (-)
Type: TC
Location: 102 - 1211 (-)
Gene ID: HRGMv2_2649_70_2
Type: pfam
Location: 1208 - 1807 (-)
Type: pfam
Location: 1208 - 1807 (-)
Gene ID: HRGMv2_2649_70_3
Type: pfam
Location: 1820 - 2839 (+)
Type: pfam
Location: 1820 - 2839 (+)
Gene ID: HRGMv2_2649_70_4
Type: CAZyme
Location: 2864 - 6133 (-)
Type: CAZyme
Location: 2864 - 6133 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Opitutales
Family
CAG-312
Genus
Merdousia
Species
Merdousia sp001917305
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.