Cluster: HRGMv2_2649_CGC32
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2649
- CGC Family ID: CGCFAM_02687
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2649_55 | HRGMv2_2649_55_7 | 6213 | 6905 | - | 3.A.1.125.5 |
| TC | HRGMv2_2649_55 | HRGMv2_2649_55_8 | 6898 | 8136 | - | 3.A.1.125.5 |
| pfam | HRGMv2_2649_55 | HRGMv2_2649_55_9 | 8140 | 9630 | - | tRNA-synt_2 | tRNA_anti-codon |
| NULL(UNKNOWN) | HRGMv2_2649_55 | HRGMv2_2649_55_10 | 9814 | 10095 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2649_55 | HRGMv2_2649_55_11 | 10183 | 11523 | + | CE11 |
Gene ID: HRGMv2_2649_55_7
Type: TC
Location: 6213 - 6905 (-)
Type: TC
Location: 6213 - 6905 (-)
Gene ID: HRGMv2_2649_55_8
Type: TC
Location: 6898 - 8136 (-)
Type: TC
Location: 6898 - 8136 (-)
Gene ID: HRGMv2_2649_55_9
Type: pfam
Location: 8140 - 9630 (-)
Type: pfam
Location: 8140 - 9630 (-)
Gene ID: HRGMv2_2649_55_10
Type:
Location: 9814 - 10095 (-)
Type:
Location: 9814 - 10095 (-)
Gene ID: HRGMv2_2649_55_11
Type: CAZyme
Location: 10183 - 11523 (+)
Type: CAZyme
Location: 10183 - 11523 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Opitutales
Family
CAG-312
Genus
Merdousia
Species
Merdousia sp001917305
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.