Cluster: HRGMv2_2649_CGC29
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2649
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2649_42 | HRGMv2_2649_42_3 | 1819 | 2670 | + | 3.D.10.1.2 |
| TC | HRGMv2_2649_42 | HRGMv2_2649_42_4 | 2688 | 4616 | + | 3.D.10.1.2 |
| TC | HRGMv2_2649_42 | HRGMv2_2649_42_5 | 4639 | 5394 | + | 3.D.10.1.5 |
| pfam | HRGMv2_2649_42 | HRGMv2_2649_42_6 | 5532 | 6947 | + | Glyco_hydro_42 | DUF4832 |
| CAZyme | HRGMv2_2649_42 | HRGMv2_2649_42_7 | 6964 | 8460 | + | GH10 |
Gene ID: HRGMv2_2649_42_3
Type: TC
Location: 1819 - 2670 (+)
Type: TC
Location: 1819 - 2670 (+)
Gene ID: HRGMv2_2649_42_4
Type: TC
Location: 2688 - 4616 (+)
Type: TC
Location: 2688 - 4616 (+)
Gene ID: HRGMv2_2649_42_5
Type: TC
Location: 4639 - 5394 (+)
Type: TC
Location: 4639 - 5394 (+)
Gene ID: HRGMv2_2649_42_6
Type: pfam
Location: 5532 - 6947 (+)
Type: pfam
Location: 5532 - 6947 (+)
Gene ID: HRGMv2_2649_42_7
Type: CAZyme
Location: 6964 - 8460 (+)
Type: CAZyme
Location: 6964 - 8460 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Opitutales
Family
CAG-312
Genus
Merdousia
Species
Merdousia sp001917305
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.