Cluster: HRGMv2_2649_CGC26
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2649
- CGC Family ID: CGCFAM_06149
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2649_35 | HRGMv2_2649_35_17 | 18285 | 20699 | - | 8.A.3.1.2 |
| TC | HRGMv2_2649_35 | HRGMv2_2649_35_18 | 20784 | 21362 | - | 1.B.18.3.5 |
| pfam | HRGMv2_2649_35 | HRGMv2_2649_35_19 | 21547 | 23511 | + | Transketolase_N | Transket_pyr | Transketolase_C_1 |
| CAZyme | HRGMv2_2649_35 | HRGMv2_2649_35_20 | 23818 | 26013 | - | GH50 |
Gene ID: HRGMv2_2649_35_17
Type: TC
Location: 18285 - 20699 (-)
Type: TC
Location: 18285 - 20699 (-)
Gene ID: HRGMv2_2649_35_18
Type: TC
Location: 20784 - 21362 (-)
Type: TC
Location: 20784 - 21362 (-)
Gene ID: HRGMv2_2649_35_19
Type: pfam
Location: 21547 - 23511 (+)
Type: pfam
Location: 21547 - 23511 (+)
Gene ID: HRGMv2_2649_35_20
Type: CAZyme
Location: 23818 - 26013 (-)
Type: CAZyme
Location: 23818 - 26013 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Opitutales
Family
CAG-312
Genus
Merdousia
Species
Merdousia sp001917305
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.