Cluster: HRGMv2_2649_CGC22
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2649
- CGC Family ID: CGCFAM_04638
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2649_25 | HRGMv2_2649_25_5 | 4577 | 5476 | - | GH16_3 |
| TC | HRGMv2_2649_25 | HRGMv2_2649_25_6 | 5645 | 7660 | - | 3.A.16.1.1 |
| pfam | HRGMv2_2649_25 | HRGMv2_2649_25_7 | 7687 | 9126 | - | ATP_bind_3 | TilS_C |
| TC | HRGMv2_2649_25 | HRGMv2_2649_25_8 | 9129 | 10868 | - | 3.A.11.1.1 |
| pfam | HRGMv2_2649_25 | HRGMv2_2649_25_9 | 10865 | 11959 | - | Peripla_BP_6 |
| NULL(UNKNOWN) | HRGMv2_2649_25 | HRGMv2_2649_25_10 | 11998 | 12867 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2649_25 | HRGMv2_2649_25_11 | 12984 | 14315 | - | 3.A.5.2.2 |
Gene ID: HRGMv2_2649_25_5
Type: CAZyme
Location: 4577 - 5476 (-)
Type: CAZyme
Location: 4577 - 5476 (-)
Gene ID: HRGMv2_2649_25_6
Type: TC
Location: 5645 - 7660 (-)
Type: TC
Location: 5645 - 7660 (-)
Gene ID: HRGMv2_2649_25_7
Type: pfam
Location: 7687 - 9126 (-)
Type: pfam
Location: 7687 - 9126 (-)
Gene ID: HRGMv2_2649_25_8
Type: TC
Location: 9129 - 10868 (-)
Type: TC
Location: 9129 - 10868 (-)
Gene ID: HRGMv2_2649_25_9
Type: pfam
Location: 10865 - 11959 (-)
Type: pfam
Location: 10865 - 11959 (-)
Gene ID: HRGMv2_2649_25_10
Type:
Location: 11998 - 12867 (-)
Type:
Location: 11998 - 12867 (-)
Gene ID: HRGMv2_2649_25_11
Type: TC
Location: 12984 - 14315 (-)
Type: TC
Location: 12984 - 14315 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Opitutales
Family
CAG-312
Genus
Merdousia
Species
Merdousia sp001917305
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.