Cluster: HRGMv2_2649_CGC20
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2649
- CGC Family ID: CGCFAM_04637
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2649_22 | HRGMv2_2649_22_9 | 8033 | 10264 | - | 1.B.52.2.1 |
| TC | HRGMv2_2649_22 | HRGMv2_2649_22_10 | 10261 | 12507 | - | 1.B.52.2.1 |
| CAZyme | HRGMv2_2649_22 | HRGMv2_2649_22_11 | 12553 | 15816 | + | GH148 |
| NULL(UNKNOWN) | HRGMv2_2649_22 | HRGMv2_2649_22_12 | 15979 | 16608 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2649_22 | HRGMv2_2649_22_13 | 16618 | 18999 | + | GH13_14 |
Gene ID: HRGMv2_2649_22_9
Type: TC
Location: 8033 - 10264 (-)
Type: TC
Location: 8033 - 10264 (-)
Gene ID: HRGMv2_2649_22_10
Type: TC
Location: 10261 - 12507 (-)
Type: TC
Location: 10261 - 12507 (-)
Gene ID: HRGMv2_2649_22_11
Type: CAZyme
Location: 12553 - 15816 (+)
Type: CAZyme
Location: 12553 - 15816 (+)
Gene ID: HRGMv2_2649_22_12
Type:
Location: 15979 - 16608 (+)
Type:
Location: 15979 - 16608 (+)
Gene ID: HRGMv2_2649_22_13
Type: CAZyme
Location: 16618 - 18999 (+)
Type: CAZyme
Location: 16618 - 18999 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Opitutales
Family
CAG-312
Genus
Merdousia
Species
Merdousia sp001917305
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.