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Cluster: HRGMv2_2649_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2649_21 HRGMv2_2649_21_8 8984 9733 - 1.B.42.1.2
NULL(UNKNOWN) HRGMv2_2649_21 HRGMv2_2649_21_9 9735 10133 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_2649_21 HRGMv2_2649_21_10 10191 13451 - MGS | ATP-grasp | ATP-grasp_3 | CPSase_L_D2 | CPSase_L_D2 | CPSase_L_D3 | Dala_Dala_lig_C
CAZyme HRGMv2_2649_21 HRGMv2_2649_21_11 13837 15117 - GH177
pfam HRGMv2_2649_21 HRGMv2_2649_21_12 15156 16124 - AP_endonuc_2
NULL(UNKNOWN) HRGMv2_2649_21 HRGMv2_2649_21_13 16433 16645 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2649_21 HRGMv2_2649_21_14 16890 17894 + 8.A.5.1.4
Gene ID: HRGMv2_2649_21_8
Type: TC
Location: 8984 - 9733 (-)
Gene ID: HRGMv2_2649_21_9
Type:
Location: 9735 - 10133 (-)
Gene ID: HRGMv2_2649_21_10
Type: pfam
Location: 10191 - 13451 (-)
Gene ID: HRGMv2_2649_21_11
Type: CAZyme
Location: 13837 - 15117 (-)
Gene ID: HRGMv2_2649_21_12
Type: pfam
Location: 15156 - 16124 (-)
Gene ID: HRGMv2_2649_21_13
Type:
Location: 16433 - 16645 (+)
Gene ID: HRGMv2_2649_21_14
Type: TC
Location: 16890 - 17894 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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