Cluster: HRGMv2_2649_CGC15
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2649
- CGC Family ID: CGCFAM_00234
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2649_17 | HRGMv2_2649_17_29 | 30134 | 31258 | + | GH5 |
| pfam | HRGMv2_2649_17 | HRGMv2_2649_17_30 | 31596 | 34286 | - | tRNA-synt_1 | Anticodon_1 | tRNA-synt_1g | tRNA-synt_1g | Val_tRNA-synt_C | tRNA-synt_1_2 |
| TC | HRGMv2_2649_17 | HRGMv2_2649_17_31 | 34473 | 35795 | - | 2.A.1.1.3 |
Gene ID: HRGMv2_2649_17_29
Type: CAZyme
Location: 30134 - 31258 (+)
Type: CAZyme
Location: 30134 - 31258 (+)
Gene ID: HRGMv2_2649_17_30
Type: pfam
Location: 31596 - 34286 (-)
Type: pfam
Location: 31596 - 34286 (-)
Gene ID: HRGMv2_2649_17_31
Type: TC
Location: 34473 - 35795 (-)
Type: TC
Location: 34473 - 35795 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Opitutales
Family
CAG-312
Genus
Merdousia
Species
Merdousia sp001917305
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.