Cluster: HRGMv2_2649_CGC13
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2649
- CGC Family ID: CGCFAM_01696
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2649_12 | HRGMv2_2649_12_3 | 2527 | 3369 | + | 3.A.1.9.2 |
| STP | HRGMv2_2649_12 | HRGMv2_2649_12_4 | 3410 | 4279 | + | SBP_bac_3 |
| TC | HRGMv2_2649_12 | HRGMv2_2649_12_5 | 4283 | 5122 | + | 3.A.1.9.2 |
| pfam | HRGMv2_2649_12 | HRGMv2_2649_12_6 | 5124 | 6122 | + | 2-Hacid_dh | 2-Hacid_dh_C | NAD_binding_2 |
| CAZyme | HRGMv2_2649_12 | HRGMv2_2649_12_7 | 6227 | 7936 | + | GH181 |
Gene ID: HRGMv2_2649_12_3
Type: TC
Location: 2527 - 3369 (+)
Type: TC
Location: 2527 - 3369 (+)
Gene ID: HRGMv2_2649_12_4
Type: STP
Location: 3410 - 4279 (+)
Type: STP
Location: 3410 - 4279 (+)
Gene ID: HRGMv2_2649_12_5
Type: TC
Location: 4283 - 5122 (+)
Type: TC
Location: 4283 - 5122 (+)
Gene ID: HRGMv2_2649_12_6
Type: pfam
Location: 5124 - 6122 (+)
Type: pfam
Location: 5124 - 6122 (+)
Gene ID: HRGMv2_2649_12_7
Type: CAZyme
Location: 6227 - 7936 (+)
Type: CAZyme
Location: 6227 - 7936 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Opitutales
Family
CAG-312
Genus
Merdousia
Species
Merdousia sp001917305
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.