Cluster: HRGMv2_2649_CGC12
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2649
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2649_11 | HRGMv2_2649_11_47 | 47056 | 48156 | + | 9.B.146.1.6 |
| pfam | HRGMv2_2649_11 | HRGMv2_2649_11_48 | 48156 | 49448 | + | Mur_ligase_C | Mur_ligase_M |
| pfam | HRGMv2_2649_11 | HRGMv2_2649_11_49 | 49485 | 50654 | + | LysM | LysM | LysM |
| TC | HRGMv2_2649_11 | HRGMv2_2649_11_50 | 50665 | 51792 | + | 2.A.103.1.3 |
| CAZyme | HRGMv2_2649_11 | HRGMv2_2649_11_51 | 51789 | 52889 | + | GT28 |
Gene ID: HRGMv2_2649_11_47
Type: TC
Location: 47056 - 48156 (+)
Type: TC
Location: 47056 - 48156 (+)
Gene ID: HRGMv2_2649_11_48
Type: pfam
Location: 48156 - 49448 (+)
Type: pfam
Location: 48156 - 49448 (+)
Gene ID: HRGMv2_2649_11_49
Type: pfam
Location: 49485 - 50654 (+)
Type: pfam
Location: 49485 - 50654 (+)
Gene ID: HRGMv2_2649_11_50
Type: TC
Location: 50665 - 51792 (+)
Type: TC
Location: 50665 - 51792 (+)
Gene ID: HRGMv2_2649_11_51
Type: CAZyme
Location: 51789 - 52889 (+)
Type: CAZyme
Location: 51789 - 52889 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Opitutales
Family
CAG-312
Genus
Merdousia
Species
Merdousia sp001917305
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.