Cluster: HRGMv2_2649_CGC10
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 5
- Substrate:
- Genome ID: HRGMv2_2649
- CGC Family ID: CGCFAM_01630
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2649_9 | HRGMv2_2649_9_45 | 36709 | 38088 | - | GH28 |
| CAZyme | HRGMv2_2649_9 | HRGMv2_2649_9_46 | 38094 | 39680 | - | CE20 |
| CAZyme | HRGMv2_2649_9 | HRGMv2_2649_9_47 | 39689 | 41275 | - | CE20 |
| CAZyme | HRGMv2_2649_9 | HRGMv2_2649_9_48 | 41291 | 42832 | - | CE20 |
| CAZyme | HRGMv2_2649_9 | HRGMv2_2649_9_49 | 42871 | 44475 | - | CE20 |
| NULL(UNKNOWN) | HRGMv2_2649_9 | HRGMv2_2649_9_50 | 44570 | 44872 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2649_9 | HRGMv2_2649_9_51 | 44869 | 45618 | + | 1.C.109.1.2 |
Gene ID: HRGMv2_2649_9_45
Type: CAZyme
Location: 36709 - 38088 (-)
Type: CAZyme
Location: 36709 - 38088 (-)
Gene ID: HRGMv2_2649_9_46
Type: CAZyme
Location: 38094 - 39680 (-)
Type: CAZyme
Location: 38094 - 39680 (-)
Gene ID: HRGMv2_2649_9_47
Type: CAZyme
Location: 39689 - 41275 (-)
Type: CAZyme
Location: 39689 - 41275 (-)
Gene ID: HRGMv2_2649_9_48
Type: CAZyme
Location: 41291 - 42832 (-)
Type: CAZyme
Location: 41291 - 42832 (-)
Gene ID: HRGMv2_2649_9_49
Type: CAZyme
Location: 42871 - 44475 (-)
Type: CAZyme
Location: 42871 - 44475 (-)
Gene ID: HRGMv2_2649_9_50
Type:
Location: 44570 - 44872 (+)
Type:
Location: 44570 - 44872 (+)
Gene ID: HRGMv2_2649_9_51
Type: TC
Location: 44869 - 45618 (+)
Type: TC
Location: 44869 - 45618 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Opitutales
Family
CAG-312
Genus
Merdousia
Species
Merdousia sp001917305
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.