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Cluster: HRGMv2_2649_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2649_1 HRGMv2_2649_1_41 48020 49045 - GT4
STP HRGMv2_2649_1 HRGMv2_2649_1_42 49152 50627 + PfkB
pfam HRGMv2_2649_1 HRGMv2_2649_1_43 50624 51133 + Hydrolase | PNK3P | Hydrolase_like | HAD_2
CAZyme HRGMv2_2649_1 HRGMv2_2649_1_44 51130 52125 - GT9
STP HRGMv2_2649_1 HRGMv2_2649_1_45 52122 52691 - SIS
NULL(UNKNOWN) HRGMv2_2649_1 HRGMv2_2649_1_46 52983 53123 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2649_1 HRGMv2_2649_1_47 53206 54690 - 2.A.6.2.14
TC HRGMv2_2649_1 HRGMv2_2649_1_48 54704 56056 - 3.A.1.122.2
TC HRGMv2_2649_1 HRGMv2_2649_1_49 56053 56748 - 3.A.1.122.2
Gene ID: HRGMv2_2649_1_41
Type: CAZyme
Location: 48020 - 49045 (-)
Gene ID: HRGMv2_2649_1_42
Type: STP
Location: 49152 - 50627 (+)
Gene ID: HRGMv2_2649_1_43
Type: pfam
Location: 50624 - 51133 (+)
Gene ID: HRGMv2_2649_1_44
Type: CAZyme
Location: 51130 - 52125 (-)
Gene ID: HRGMv2_2649_1_45
Type: STP
Location: 52122 - 52691 (-)
Gene ID: HRGMv2_2649_1_46
Type:
Location: 52983 - 53123 (+)
Gene ID: HRGMv2_2649_1_47
Type: TC
Location: 53206 - 54690 (-)
Gene ID: HRGMv2_2649_1_48
Type: TC
Location: 54704 - 56056 (-)
Gene ID: HRGMv2_2649_1_49
Type: TC
Location: 56053 - 56748 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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