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Cluster: HRGMv2_2636_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2636_22 HRGMv2_2636_22_25 26175 27017 - 3.A.1.103.6
TC HRGMv2_2636_22 HRGMv2_2636_22_26 27001 27912 - 3.A.1.104.2
CAZyme HRGMv2_2636_22 HRGMv2_2636_22_27 28030 29337 - GT2
NULL(UNKNOWN) HRGMv2_2636_22 HRGMv2_2636_22_28 29372 30217 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_2636_22 HRGMv2_2636_22_29 30224 31012 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2636_22 HRGMv2_2636_22_30 31021 32472 - GT4
CAZyme HRGMv2_2636_22 HRGMv2_2636_22_31 32491 34050 - GT4
CAZyme HRGMv2_2636_22 HRGMv2_2636_22_32 34047 35339 - GT4
Gene ID: HRGMv2_2636_22_25
Type: TC
Location: 26175 - 27017 (-)
Gene ID: HRGMv2_2636_22_26
Type: TC
Location: 27001 - 27912 (-)
Gene ID: HRGMv2_2636_22_27
Type: CAZyme
Location: 28030 - 29337 (-)
Gene ID: HRGMv2_2636_22_28
Type:
Location: 29372 - 30217 (-)
Gene ID: HRGMv2_2636_22_29
Type:
Location: 30224 - 31012 (-)
Gene ID: HRGMv2_2636_22_30
Type: CAZyme
Location: 31021 - 32472 (-)
Gene ID: HRGMv2_2636_22_31
Type: CAZyme
Location: 32491 - 34050 (-)
Gene ID: HRGMv2_2636_22_32
Type: CAZyme
Location: 34047 - 35339 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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