dbCAN Logo

Cluster: HRGMv2_2636_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2636_9 HRGMv2_2636_9_27 25542 26984 - GT20
NULL(UNKNOWN) HRGMv2_2636_9 HRGMv2_2636_9_28 26999 27358 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2636_9 HRGMv2_2636_9_29 27445 29181 - 2.A.79.1.1
STP HRGMv2_2636_9 HRGMv2_2636_9_30 29405 29986 - TetR_N
TC HRGMv2_2636_9 HRGMv2_2636_9_31 29952 31463 - 2.A.1.3.19
pfam HRGMv2_2636_9 HRGMv2_2636_9_32 31636 33381 + TPP_enzyme_M | TPP_enzyme_C | TPP_enzyme_N
TF HRGMv2_2636_9 HRGMv2_2636_9_33 33568 34272 + Trans_reg_C
TC HRGMv2_2636_9 HRGMv2_2636_9_34 34285 35790 + 2.A.21.9.1
Gene ID: HRGMv2_2636_9_27
Type: CAZyme
Location: 25542 - 26984 (-)
Gene ID: HRGMv2_2636_9_28
Type:
Location: 26999 - 27358 (-)
Gene ID: HRGMv2_2636_9_29
Type: TC
Location: 27445 - 29181 (-)
Gene ID: HRGMv2_2636_9_30
Type: STP
Location: 29405 - 29986 (-)
Gene ID: HRGMv2_2636_9_31
Type: TC
Location: 29952 - 31463 (-)
Gene ID: HRGMv2_2636_9_32
Type: pfam
Location: 31636 - 33381 (+)
Gene ID: HRGMv2_2636_9_33
Type: TF
Location: 33568 - 34272 (+)
Gene ID: HRGMv2_2636_9_34
Type: TC
Location: 34285 - 35790 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List