dbCAN Logo

Cluster: HRGMv2_2635_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2635_12 HRGMv2_2635_12_38 35287 36234 + 3.A.1.14.13
TC HRGMv2_2635_12 HRGMv2_2635_12_39 36250 37320 + 3.A.1.14.13
TC HRGMv2_2635_12 HRGMv2_2635_12_40 37324 38358 + 3.A.1.14.13
TC HRGMv2_2635_12 HRGMv2_2635_12_41 38443 39285 + 3.A.1.14.13
NULL(UNKNOWN) HRGMv2_2635_12 HRGMv2_2635_12_42 39322 39714 - NULL(UNKNOWN)
[View Structural Homologs]
STP HRGMv2_2635_12 HRGMv2_2635_12_43 39711 40595 - PfkB
CAZyme HRGMv2_2635_12 HRGMv2_2635_12_44 40616 41824 + GH32
TC HRGMv2_2635_12 HRGMv2_2635_12_45 41958 43979 + 4.A.1.2.12
Gene ID: HRGMv2_2635_12_38
Type: TC
Location: 35287 - 36234 (+)
Gene ID: HRGMv2_2635_12_39
Type: TC
Location: 36250 - 37320 (+)
Gene ID: HRGMv2_2635_12_40
Type: TC
Location: 37324 - 38358 (+)
Gene ID: HRGMv2_2635_12_41
Type: TC
Location: 38443 - 39285 (+)
Gene ID: HRGMv2_2635_12_42
Type:
Location: 39322 - 39714 (-)
Gene ID: HRGMv2_2635_12_43
Type: STP
Location: 39711 - 40595 (-)
Gene ID: HRGMv2_2635_12_44
Type: CAZyme
Location: 40616 - 41824 (+)
Gene ID: HRGMv2_2635_12_45
Type: TC
Location: 41958 - 43979 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List