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Cluster: HRGMv2_2635_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2635_5 HRGMv2_2635_5_38 39660 41165 - 2.A.21.9.1
TF HRGMv2_2635_5 HRGMv2_2635_5_39 41178 41882 - Trans_reg_C
pfam HRGMv2_2635_5 HRGMv2_2635_5_40 42070 43815 - TPP_enzyme_M | TPP_enzyme_C | TPP_enzyme_N
TC HRGMv2_2635_5 HRGMv2_2635_5_41 43988 45481 + 2.A.1.3.19
STP HRGMv2_2635_5 HRGMv2_2635_5_42 45465 46019 + TetR_N
TC HRGMv2_2635_5 HRGMv2_2635_5_43 46272 48008 + 2.A.79.1.1
NULL(UNKNOWN) HRGMv2_2635_5 HRGMv2_2635_5_44 48095 48454 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2635_5 HRGMv2_2635_5_45 48469 49911 + GT20
Gene ID: HRGMv2_2635_5_38
Type: TC
Location: 39660 - 41165 (-)
Gene ID: HRGMv2_2635_5_39
Type: TF
Location: 41178 - 41882 (-)
Gene ID: HRGMv2_2635_5_40
Type: pfam
Location: 42070 - 43815 (-)
Gene ID: HRGMv2_2635_5_41
Type: TC
Location: 43988 - 45481 (+)
Gene ID: HRGMv2_2635_5_42
Type: STP
Location: 45465 - 46019 (+)
Gene ID: HRGMv2_2635_5_43
Type: TC
Location: 46272 - 48008 (+)
Gene ID: HRGMv2_2635_5_44
Type:
Location: 48095 - 48454 (+)
Gene ID: HRGMv2_2635_5_45
Type: CAZyme
Location: 48469 - 49911 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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