Cluster: HRGMv2_2633_CGC7
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2633
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2633_2 | HRGMv2_2633_2_226 | 272130 | 273143 | + | 3.A.1.15.1 |
| TC | HRGMv2_2633_2 | HRGMv2_2633_2_227 | 273143 | 273874 | + | 3.A.1.15.4 |
| TC | HRGMv2_2633_2 | HRGMv2_2633_2_228 | 273871 | 274809 | + | 3.A.1.15.1 |
| STP | HRGMv2_2633_2 | HRGMv2_2633_2_229 | 274816 | 276174 | - | STAS |
| pfam | HRGMv2_2633_2 | HRGMv2_2633_2_230 | 276202 | 276717 | - | Acetyltransf_1 | FR47 | Acetyltransf_3 | Acetyltransf_7 | Acetyltransf_10 |
| CAZyme | HRGMv2_2633_2 | HRGMv2_2633_2_231 | 277089 | 278657 | + | GH5_27 |
Gene ID: HRGMv2_2633_2_226
Type: TC
Location: 272130 - 273143 (+)
Type: TC
Location: 272130 - 273143 (+)
Gene ID: HRGMv2_2633_2_227
Type: TC
Location: 273143 - 273874 (+)
Type: TC
Location: 273143 - 273874 (+)
Gene ID: HRGMv2_2633_2_228
Type: TC
Location: 273871 - 274809 (+)
Type: TC
Location: 273871 - 274809 (+)
Gene ID: HRGMv2_2633_2_229
Type: STP
Location: 274816 - 276174 (-)
Type: STP
Location: 274816 - 276174 (-)
Gene ID: HRGMv2_2633_2_230
Type: pfam
Location: 276202 - 276717 (-)
Type: pfam
Location: 276202 - 276717 (-)
Gene ID: HRGMv2_2633_2_231
Type: CAZyme
Location: 277089 - 278657 (+)
Type: CAZyme
Location: 277089 - 278657 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Corynebacterium
Species
Corynebacterium sp902373425
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.