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Cluster: HRGMv2_2633_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2633_12 HRGMv2_2633_12_38 33946 35574 - 9.B.18.1.2
pfam HRGMv2_2633_12 HRGMv2_2633_12_39 35951 36940 + NTP_transferase | NTP_transf_3
pfam HRGMv2_2633_12 HRGMv2_2633_12_40 36926 37420 - Hexapep
CAZyme HRGMv2_2633_12 HRGMv2_2633_12_41 37541 38614 + GT4
NULL(UNKNOWN) HRGMv2_2633_12 HRGMv2_2633_12_42 38743 40131 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2633_12 HRGMv2_2633_12_43 40132 41844 + 8.A.3.1.2
pfam HRGMv2_2633_12 HRGMv2_2633_12_44 41860 42444 + LMWPc
NULL(UNKNOWN) HRGMv2_2633_12 HRGMv2_2633_12_45 42480 43061 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2633_12 HRGMv2_2633_12_46 43264 45480 + 4.A.1.2.2
TC HRGMv2_2633_12 HRGMv2_2633_12_47 45566 47878 - 2.A.6.5.1
Gene ID: HRGMv2_2633_12_38
Type: TC
Location: 33946 - 35574 (-)
Gene ID: HRGMv2_2633_12_39
Type: pfam
Location: 35951 - 36940 (+)
Gene ID: HRGMv2_2633_12_40
Type: pfam
Location: 36926 - 37420 (-)
Gene ID: HRGMv2_2633_12_41
Type: CAZyme
Location: 37541 - 38614 (+)
Gene ID: HRGMv2_2633_12_42
Type:
Location: 38743 - 40131 (+)
Gene ID: HRGMv2_2633_12_43
Type: TC
Location: 40132 - 41844 (+)
Gene ID: HRGMv2_2633_12_44
Type: pfam
Location: 41860 - 42444 (+)
Gene ID: HRGMv2_2633_12_45
Type:
Location: 42480 - 43061 (+)
Gene ID: HRGMv2_2633_12_46
Type: TC
Location: 43264 - 45480 (+)
Gene ID: HRGMv2_2633_12_47
Type: TC
Location: 45566 - 47878 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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