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Cluster: HRGMv2_2633_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2633_1 HRGMv2_2633_1_144 129723 130487 - 3.A.1.105.3
TC HRGMv2_2633_1 HRGMv2_2633_1_145 130518 131516 - 3.A.1.105.3
peptidase HRGMv2_2633_1 HRGMv2_2633_1_146 131581 132537 - S01.UPA
pfam HRGMv2_2633_1 HRGMv2_2633_1_147 132759 134855 + Phosphoesterase | TAT_signal
TC HRGMv2_2633_1 HRGMv2_2633_1_148 134827 135618 + 1.C.113.1.6
pfam HRGMv2_2633_1 HRGMv2_2633_1_149 135805 136290 - Abi_2
pfam HRGMv2_2633_1 HRGMv2_2633_1_150 136312 136704 - Abi_2
TC HRGMv2_2633_1 HRGMv2_2633_1_151 137179 139092 + 2.A.79.1.1
NULL(UNKNOWN) HRGMv2_2633_1 HRGMv2_2633_1_152 139184 139651 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2633_1 HRGMv2_2633_1_153 139879 141405 + GT20
Gene ID: HRGMv2_2633_1_144
Type: TC
Location: 129723 - 130487 (-)
Gene ID: HRGMv2_2633_1_145
Type: TC
Location: 130518 - 131516 (-)
Gene ID: HRGMv2_2633_1_146
Type: peptidase
Location: 131581 - 132537 (-)
Gene ID: HRGMv2_2633_1_147
Type: pfam
Location: 132759 - 134855 (+)
Gene ID: HRGMv2_2633_1_148
Type: TC
Location: 134827 - 135618 (+)
Gene ID: HRGMv2_2633_1_149
Type: pfam
Location: 135805 - 136290 (-)
Gene ID: HRGMv2_2633_1_150
Type: pfam
Location: 136312 - 136704 (-)
Gene ID: HRGMv2_2633_1_151
Type: TC
Location: 137179 - 139092 (+)
Gene ID: HRGMv2_2633_1_152
Type:
Location: 139184 - 139651 (+)
Gene ID: HRGMv2_2633_1_153
Type: CAZyme
Location: 139879 - 141405 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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