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Cluster: HRGMv2_2633_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2633_10 HRGMv2_2633_10_2 797 2428 + 3.A.1.5.35
TC HRGMv2_2633_10 HRGMv2_2633_10_3 2564 3490 + 3.A.1.5.35
TC HRGMv2_2633_10 HRGMv2_2633_10_4 3707 4546 + 3.A.1.5.35
TC HRGMv2_2633_10 HRGMv2_2633_10_5 4543 6342 + 3.A.1.5.23
NULL(UNKNOWN) HRGMv2_2633_10 HRGMv2_2633_10_6 6395 6769 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_2633_10 HRGMv2_2633_10_7 6760 7212 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2633_10 HRGMv2_2633_10_8 7373 9991 - 3.A.1.125.3
TC HRGMv2_2633_10 HRGMv2_2633_10_9 9988 10755 - 3.A.1.125.3
CAZyme HRGMv2_2633_10 HRGMv2_2633_10_10 10816 13104 - GT89
Gene ID: HRGMv2_2633_10_2
Type: TC
Location: 797 - 2428 (+)
Gene ID: HRGMv2_2633_10_3
Type: TC
Location: 2564 - 3490 (+)
Gene ID: HRGMv2_2633_10_4
Type: TC
Location: 3707 - 4546 (+)
Gene ID: HRGMv2_2633_10_5
Type: TC
Location: 4543 - 6342 (+)
Gene ID: HRGMv2_2633_10_6
Type:
Location: 6395 - 6769 (+)
Gene ID: HRGMv2_2633_10_7
Type:
Location: 6760 - 7212 (+)
Gene ID: HRGMv2_2633_10_8
Type: TC
Location: 7373 - 9991 (-)
Gene ID: HRGMv2_2633_10_9
Type: TC
Location: 9988 - 10755 (-)
Gene ID: HRGMv2_2633_10_10
Type: CAZyme
Location: 10816 - 13104 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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