dbCAN Logo

Cluster: HRGMv2_2633_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2633_8 HRGMv2_2633_8_54 55289 57007 + 4.C.1.1.7
TC HRGMv2_2633_8 HRGMv2_2633_8_55 57281 58981 + 4.C.1.1.4
TC HRGMv2_2633_8 HRGMv2_2633_8_56 59187 60893 + 4.C.1.1.7
TC HRGMv2_2633_8 HRGMv2_2633_8_57 60940 62469 - 8.A.59.2.2
STP HRGMv2_2633_8 HRGMv2_2633_8_58 62507 63910 + AAA
sulfatase HRGMv2_2633_8 HRGMv2_2633_8_59 64753 65607 - S1_4
TC HRGMv2_2633_8 HRGMv2_2633_8_60 65656 67188 + 2.A.1.71.2
CAZyme HRGMv2_2633_8 HRGMv2_2633_8_61 67279 68013 + CE1
NULL(UNKNOWN) HRGMv2_2633_8 HRGMv2_2633_8_62 67974 68243 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2633_8 HRGMv2_2633_8_63 68327 69223 - 2.A.7.35.8
Gene ID: HRGMv2_2633_8_54
Type: TC
Location: 55289 - 57007 (+)
Gene ID: HRGMv2_2633_8_55
Type: TC
Location: 57281 - 58981 (+)
Gene ID: HRGMv2_2633_8_56
Type: TC
Location: 59187 - 60893 (+)
Gene ID: HRGMv2_2633_8_57
Type: TC
Location: 60940 - 62469 (-)
Gene ID: HRGMv2_2633_8_58
Type: STP
Location: 62507 - 63910 (+)
Gene ID: HRGMv2_2633_8_59
Type: sulfatase
Location: 64753 - 65607 (-)
Gene ID: HRGMv2_2633_8_60
Type: TC
Location: 65656 - 67188 (+)
Gene ID: HRGMv2_2633_8_61
Type: CAZyme
Location: 67279 - 68013 (+)
Gene ID: HRGMv2_2633_8_62
Type:
Location: 67974 - 68243 (+)
Gene ID: HRGMv2_2633_8_63
Type: TC
Location: 68327 - 69223 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List