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Cluster: HRGMv2_2633_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2633_7 HRGMv2_2633_7_9 8310 9161 + 3.A.1.103.4
CAZyme HRGMv2_2633_7 HRGMv2_2633_7_10 9207 10184 + GT2
TC HRGMv2_2633_7 HRGMv2_2633_7_11 10286 11167 + 2.A.108.2.3
TC HRGMv2_2633_7 HRGMv2_2633_7_12 11242 12582 + 2.A.108.2.3
pfam HRGMv2_2633_7 HRGMv2_2633_7_13 12723 14189 + Dyp_perox_N | Dyp_perox_C
pfam HRGMv2_2633_7 HRGMv2_2633_7_14 14261 14614 - Trns_repr_metal
TC HRGMv2_2633_7 HRGMv2_2633_7_15 14611 17061 - 3.A.3.5.31
Gene ID: HRGMv2_2633_7_9
Type: TC
Location: 8310 - 9161 (+)
Gene ID: HRGMv2_2633_7_10
Type: CAZyme
Location: 9207 - 10184 (+)
Gene ID: HRGMv2_2633_7_11
Type: TC
Location: 10286 - 11167 (+)
Gene ID: HRGMv2_2633_7_12
Type: TC
Location: 11242 - 12582 (+)
Gene ID: HRGMv2_2633_7_13
Type: pfam
Location: 12723 - 14189 (+)
Gene ID: HRGMv2_2633_7_14
Type: pfam
Location: 14261 - 14614 (-)
Gene ID: HRGMv2_2633_7_15
Type: TC
Location: 14611 - 17061 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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