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Cluster: HRGMv2_2632_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2632_1 HRGMv2_2632_1_317 358209 358922 + 1.C.82.1.1
TC HRGMv2_2632_1 HRGMv2_2632_1_318 359609 361207 + 2.A.21.3.20
NULL(UNKNOWN) HRGMv2_2632_1 HRGMv2_2632_1_319 361403 361765 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_2632_1 HRGMv2_2632_1_320 362020 362940 - DUF4862
TC HRGMv2_2632_1 HRGMv2_2632_1_321 362943 364556 - 2.A.1.12.1
CAZyme HRGMv2_2632_1 HRGMv2_2632_1_322 364782 367202 + GH33
pfam HRGMv2_2632_1 HRGMv2_2632_1_323 367339 368256 + DHDPS
sulfatase HRGMv2_2632_1 HRGMv2_2632_1_324 368762 369538 - S1_9
CAZyme HRGMv2_2632_1 HRGMv2_2632_1_325 369716 371038 - CE9
Gene ID: HRGMv2_2632_1_317
Type: TC
Location: 358209 - 358922 (+)
Gene ID: HRGMv2_2632_1_318
Type: TC
Location: 359609 - 361207 (+)
Gene ID: HRGMv2_2632_1_319
Type:
Location: 361403 - 361765 (+)
Gene ID: HRGMv2_2632_1_320
Type: pfam
Location: 362020 - 362940 (-)
Gene ID: HRGMv2_2632_1_321
Type: TC
Location: 362943 - 364556 (-)
Gene ID: HRGMv2_2632_1_322
Type: CAZyme
Location: 364782 - 367202 (+)
Gene ID: HRGMv2_2632_1_323
Type: pfam
Location: 367339 - 368256 (+)
Gene ID: HRGMv2_2632_1_324
Type: sulfatase
Location: 368762 - 369538 (-)
Gene ID: HRGMv2_2632_1_325
Type: CAZyme
Location: 369716 - 371038 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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