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Cluster: HRGMv2_2632_CGC22

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2632_7 HRGMv2_2632_7_46 52402 54669 + GT89
TC HRGMv2_2632_7 HRGMv2_2632_7_47 54678 55445 + 3.A.1.125.3
TC HRGMv2_2632_7 HRGMv2_2632_7_48 55442 58060 + 3.A.1.125.3
NULL(UNKNOWN) HRGMv2_2632_7 HRGMv2_2632_7_49 58235 59038 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2632_7 HRGMv2_2632_7_50 59089 60882 - 3.A.1.5.23
TC HRGMv2_2632_7 HRGMv2_2632_7_51 60879 61973 - 3.A.1.5.35
TC HRGMv2_2632_7 HRGMv2_2632_7_52 61966 62892 - 3.A.1.5.35
TC HRGMv2_2632_7 HRGMv2_2632_7_53 62941 64572 - 3.A.1.5.35
Gene ID: HRGMv2_2632_7_46
Type: CAZyme
Location: 52402 - 54669 (+)
Gene ID: HRGMv2_2632_7_47
Type: TC
Location: 54678 - 55445 (+)
Gene ID: HRGMv2_2632_7_48
Type: TC
Location: 55442 - 58060 (+)
Gene ID: HRGMv2_2632_7_49
Type:
Location: 58235 - 59038 (-)
Gene ID: HRGMv2_2632_7_50
Type: TC
Location: 59089 - 60882 (-)
Gene ID: HRGMv2_2632_7_51
Type: TC
Location: 60879 - 61973 (-)
Gene ID: HRGMv2_2632_7_52
Type: TC
Location: 61966 - 62892 (-)
Gene ID: HRGMv2_2632_7_53
Type: TC
Location: 62941 - 64572 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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