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Cluster: HRGMv2_2632_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2632_1 HRGMv2_2632_1_14 21933 22304 + 2.A.6.5.1
TC HRGMv2_2632_1 HRGMv2_2632_1_15 22315 24552 - 4.A.1.2.2
NULL(UNKNOWN) HRGMv2_2632_1 HRGMv2_2632_1_16 24774 25355 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_2632_1 HRGMv2_2632_1_17 25418 26002 - LMWPc
TC HRGMv2_2632_1 HRGMv2_2632_1_18 26018 27868 - 8.A.3.1.2
NULL(UNKNOWN) HRGMv2_2632_1 HRGMv2_2632_1_19 27869 29161 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2632_1 HRGMv2_2632_1_20 29334 30365 - GT4
pfam HRGMv2_2632_1 HRGMv2_2632_1_21 30443 30979 + Hexapep
pfam HRGMv2_2632_1 HRGMv2_2632_1_22 30965 31936 - NTP_transferase | NTP_transf_3
TC HRGMv2_2632_1 HRGMv2_2632_1_23 32381 33991 + 9.B.18.1.2
Gene ID: HRGMv2_2632_1_14
Type: TC
Location: 21933 - 22304 (+)
Gene ID: HRGMv2_2632_1_15
Type: TC
Location: 22315 - 24552 (-)
Gene ID: HRGMv2_2632_1_16
Type:
Location: 24774 - 25355 (-)
Gene ID: HRGMv2_2632_1_17
Type: pfam
Location: 25418 - 26002 (-)
Gene ID: HRGMv2_2632_1_18
Type: TC
Location: 26018 - 27868 (-)
Gene ID: HRGMv2_2632_1_19
Type:
Location: 27869 - 29161 (-)
Gene ID: HRGMv2_2632_1_20
Type: CAZyme
Location: 29334 - 30365 (-)
Gene ID: HRGMv2_2632_1_21
Type: pfam
Location: 30443 - 30979 (+)
Gene ID: HRGMv2_2632_1_22
Type: pfam
Location: 30965 - 31936 (-)
Gene ID: HRGMv2_2632_1_23
Type: TC
Location: 32381 - 33991 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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