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Cluster: HRGMv2_2631_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2631_5 HRGMv2_2631_5_161 177007 179442 + 3.A.3.5.31
pfam HRGMv2_2631_5 HRGMv2_2631_5_162 179439 179792 + Trns_repr_metal
pfam HRGMv2_2631_5 HRGMv2_2631_5_163 179832 181289 - Dyp_perox_N | Dyp_perox_C
TC HRGMv2_2631_5 HRGMv2_2631_5_164 181392 182732 - 2.A.108.2.3
pfam HRGMv2_2631_5 HRGMv2_2631_5_165 182784 183425 - FTR1
NULL(UNKNOWN) HRGMv2_2631_5 HRGMv2_2631_5_166 183606 183707 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2631_5 HRGMv2_2631_5_167 183785 184762 - GT2
TC HRGMv2_2631_5 HRGMv2_2631_5_168 184833 185699 - 3.A.1.103.4
Gene ID: HRGMv2_2631_5_161
Type: TC
Location: 177007 - 179442 (+)
Gene ID: HRGMv2_2631_5_162
Type: pfam
Location: 179439 - 179792 (+)
Gene ID: HRGMv2_2631_5_163
Type: pfam
Location: 179832 - 181289 (-)
Gene ID: HRGMv2_2631_5_164
Type: TC
Location: 181392 - 182732 (-)
Gene ID: HRGMv2_2631_5_165
Type: pfam
Location: 182784 - 183425 (-)
Gene ID: HRGMv2_2631_5_166
Type:
Location: 183606 - 183707 (-)
Gene ID: HRGMv2_2631_5_167
Type: CAZyme
Location: 183785 - 184762 (-)
Gene ID: HRGMv2_2631_5_168
Type: TC
Location: 184833 - 185699 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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