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Cluster: HRGMv2_2631_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2631_3 HRGMv2_2631_3_312 374931 377126 + GT89
TC HRGMv2_2631_3 HRGMv2_2631_3_313 377135 377902 + 3.A.1.125.3
TC HRGMv2_2631_3 HRGMv2_2631_3_314 377899 380517 + 3.A.1.125.3
TC HRGMv2_2631_3 HRGMv2_2631_3_315 380559 382352 - 3.A.1.5.23
TC HRGMv2_2631_3 HRGMv2_2631_3_316 382352 383434 - 3.A.1.5.35
TC HRGMv2_2631_3 HRGMv2_2631_3_317 383427 384353 - 3.A.1.5.35
TC HRGMv2_2631_3 HRGMv2_2631_3_318 384390 386021 - 3.A.1.5.35
Gene ID: HRGMv2_2631_3_312
Type: CAZyme
Location: 374931 - 377126 (+)
Gene ID: HRGMv2_2631_3_313
Type: TC
Location: 377135 - 377902 (+)
Gene ID: HRGMv2_2631_3_314
Type: TC
Location: 377899 - 380517 (+)
Gene ID: HRGMv2_2631_3_315
Type: TC
Location: 380559 - 382352 (-)
Gene ID: HRGMv2_2631_3_316
Type: TC
Location: 382352 - 383434 (-)
Gene ID: HRGMv2_2631_3_317
Type: TC
Location: 383427 - 384353 (-)
Gene ID: HRGMv2_2631_3_318
Type: TC
Location: 384390 - 386021 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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