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Cluster: HRGMv2_2631_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2631_3 HRGMv2_2631_3_173 199831 201036 + 4.D.2.4.1
TC HRGMv2_2631_3 HRGMv2_2631_3_174 201115 201636 + 9.B.185.1.3
TC HRGMv2_2631_3 HRGMv2_2631_3_175 201697 202215 + 2.A.17.1.7
TC HRGMv2_2631_3 HRGMv2_2631_3_176 202206 203198 + 2.A.17.1.7
pfam HRGMv2_2631_3 HRGMv2_2631_3_177 203317 204768 - DUF963
CAZyme HRGMv2_2631_3 HRGMv2_2631_3_178 205435 206382 - CE5
NULL(UNKNOWN) HRGMv2_2631_3 HRGMv2_2631_3_179 206407 207069 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2631_3 HRGMv2_2631_3_180 207188 209224 - CE1
CAZyme HRGMv2_2631_3 HRGMv2_2631_3_181 209489 210676 - CE1
pfam HRGMv2_2631_3 HRGMv2_2631_3_182 210955 211992 - UbiA
pfam HRGMv2_2631_3 HRGMv2_2631_3_183 212075 212599 - PAP2 | PAP2_3
CAZyme HRGMv2_2631_3 HRGMv2_2631_3_184 212589 214730 - GT2
TC HRGMv2_2631_3 HRGMv2_2631_3_185 216728 218599 + 4.A.1.1.13
sulfatase HRGMv2_2631_3 HRGMv2_2631_3_186 218583 220127 - S1_6
TC HRGMv2_2631_3 HRGMv2_2631_3_187 220158 222524 - 2.A.15.1.4
CAZyme HRGMv2_2631_3 HRGMv2_2631_3_188 222860 224632 + AA3_2
Gene ID: HRGMv2_2631_3_173
Type: TC
Location: 199831 - 201036 (+)
Gene ID: HRGMv2_2631_3_174
Type: TC
Location: 201115 - 201636 (+)
Gene ID: HRGMv2_2631_3_175
Type: TC
Location: 201697 - 202215 (+)
Gene ID: HRGMv2_2631_3_176
Type: TC
Location: 202206 - 203198 (+)
Gene ID: HRGMv2_2631_3_177
Type: pfam
Location: 203317 - 204768 (-)
Gene ID: HRGMv2_2631_3_178
Type: CAZyme
Location: 205435 - 206382 (-)
Gene ID: HRGMv2_2631_3_179
Type:
Location: 206407 - 207069 (-)
Gene ID: HRGMv2_2631_3_180
Type: CAZyme
Location: 207188 - 209224 (-)
Gene ID: HRGMv2_2631_3_181
Type: CAZyme
Location: 209489 - 210676 (-)
Gene ID: HRGMv2_2631_3_182
Type: pfam
Location: 210955 - 211992 (-)
Gene ID: HRGMv2_2631_3_183
Type: pfam
Location: 212075 - 212599 (-)
Gene ID: HRGMv2_2631_3_184
Type: CAZyme
Location: 212589 - 214730 (-)
Gene ID: HRGMv2_2631_3_185
Type: TC
Location: 216728 - 218599 (+)
Gene ID: HRGMv2_2631_3_186
Type: sulfatase
Location: 218583 - 220127 (-)
Gene ID: HRGMv2_2631_3_187
Type: TC
Location: 220158 - 222524 (-)
Gene ID: HRGMv2_2631_3_188
Type: CAZyme
Location: 222860 - 224632 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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